Indiana University

 

Quarry Applications

Package Name Summary
Amber Molecular Dynamics: Assisted Model Building with Energy Refinement
ANSYS ANSYS is a commercial finite element code
AutoDock A suite of automated docking tools
Cern Program Library The CERN Program Library is a large collection of general purpose libraries
Climate Data Operators NetCDF aware Common Data Operators
Cmake Cross platform build system
Curl A command line tool for transferring files with URL syntax
Emacs Emacs is an extensible, customizable text editor
EMBOSS Software for molecular biology analysis
Fast Fourier Transforms Real and complex discrete Fourier transforms
FLUENT General purpose fluid dynamics software
GAMBIT GAMBIT is geometry and mesh generation software for computational fluid dynamics (CFD) analysis
Gamess The General Atomic and Molecular Electronic Structure System
GARLI The GARLI package conducts phylogenetic searches on aligned sequences using maximum likelihood criteria.
Gaussian Gaussian is a general purpose ab initio electronic structure package
GenomeThreader GenomeThreader is a software tool to compute gene structure predictions
Global Arrays The Global Arrays (GA) toolkit provides an efficient and portable "shared-memory" programming interface for distributed-memory computers
GNU binary Utilities A collection of binary tools
GNU compiler collection C, C++, Fortran, Objective-C, Java and Ada compilers
Gnu Scientific Library A numerical library for C and C++ programmers
Gnuplot Gnuplot is a portable command-line driven interactive data and function plotting utility.
Graphviz Graph Visualization Software
HDF5 Hierarchical Data Format
Insight Toolkit Insight Segmentation and Registration Toolkit (ITK)
Intel compiler suite Intel compiler suite